Stef, your bench really looks nice.
Try this. On my sensor pickups I use a common straight cooper tube like yours, very small diameter. However, to guard against any air turbulence that might try and ram into the hole at the end of the tube, I place a "rubber hat tube" over the sensor pickup. Seal off one end of the "hat tube". That way the pickup sensor can "see" only static air and never any "direct moving air."
Also, I notice you are using two separate pickup points on the top side of the orifice. Try using just one pickup sensor and use a "T" connection to separate the one common sensor port for the two manometers. This will give better balance to the two manometers that are sharing that one top side orfice chamber looking for the static pressure in that chamber.
My bench works very nicely with a common reference for that top chamber to the manometers. Good luck.